BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032H12LP1|AL429654
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1663 0.0
>3x_Contig1724
Length = 20938
Score = 1663 bits (839), Expect = 0.0
Identities = 869/874 (99%), Gaps = 4/874 (0%)
Strand = Plus / Plus
Query: 1 ggtgcatatagagtgattacgttatatctattgcaagttcaagatgccgaccatgaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11530 ggtgcatatagagtgattacgttatatctattgcaagttcaagatgccgaccatgaagag 11589
Query: 61 tgtggtgatacagatctcgcagactagggttatttgtgggttcagcaaccaagatttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11590 tgtggtgatacagatctcgcagactagggttatttgtgggttcagcaaccaagatttgcc 11649
Query: 121 gcagttaattgtaccatctcaatatttggcctataaaagagatggatcggatgttaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11650 gcagttaattgtaccatctcaatatttggcctataaaagagatggatcggatgttaaagt 11709
Query: 181 tttcggtaaatgggaaatgatagagcattgcgacgatgagagcgctgaaatataccaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11710 tttcggtaaatgggaaatgatagagcattgcgacgatgagagcgctgaaatataccaatt 11769
Query: 241 gtacgataagaacggacttccaaatgattgggatatgatggatgctcaatggcagtacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11770 gtacgataagaacggacttccaaatgattgggatatgatggatgctcaatggcagtacat 11829
Query: 301 actattcaaaagcctaggcatacagttcgaagactatccagtatgtgttgtcttaccttc 360
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11830 -ct-ttc-aaagcctaggcatacagttcgaagactatccagtatgtgttgtcttaccttc 11886
Query: 361 cgacttaaacagtgcgcgtcgtaagagatttatggaacaactgttggggtacggttttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11887 cgacttaaacagtgcgcgtcgtaagagatttatggaacaactgttggggtacggttttcc 11946
Query: 421 aatggtccaacttttgaatgaggctgtctgcaacacgttgagtcagggaagatcgagtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11947 aatggtccaacttttgaatgaggctgtctgcaacacgttgagtcagggaagatcgagtgg 12006
Query: 481 aattgtggtggacattggccacagtggagtgaaagtggacgttgtcattgatggtgttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12007 aattgtggtggacattggccacagtggagtgaaagtggacgttgtcattgatggtgttct 12066
Query: 541 tttcaaacaataccgcaa-gagaacaagatcggtggtgcattcttaaactggcagatctg 599
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12067 tttcaaacaataccgcaaggagaacaagatcggtggtgcattcttaaactggcagatctg 12126
Query: 600 cgatcaatatttgaagcaggattcgggcaaatcaacgaaaatctggagggatgccactga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12127 cgatcaatatttgaagcaggattcgggcaaatcaacgaaaatctggagggatgccactga 12186
Query: 660 atggctacccaacttcaagaatagcatgctgcaagtttctccgattgaattggatgctaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12187 atggctacccaacttcaagaatagcatgctgcaagtttctccgattgaattggatgctaa 12246
Query: 720 ttatgacgtggctcctcattaccaacatatggtgtcaccaatggacttgaccaaaaattt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12247 ttatgacgtggctcctcattaccaacatatggtgtcaccaatggacttgaccaaaaattt 12306
Query: 780 cctactcgataagaaaactctcaccttcactaacaaacagctatacaccattggagaact 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12307 cctactcgataagaaaactctcaccttcactaacaaacagctatacaccattggagaact 12366
Query: 840 cttgttcaagccagtgatacacgtaagtnacaat 873
|||||||||||||||||||||||||||| |||||
Sbjct: 12367 cttgttcaagccagtgatacacgtaagtaacaat 12400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5552
Number of Sequences: 1807
Number of extensions: 5552
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)